Publications
This is a selection of our recent publications:R. Lyle, P. Prandini, K. Osoegawa, B. ten Hallers, S. Humphray, B. Zhu, E. Eyras, R. Castelo, C.P. Bird, S. Cagos, C. Scott, A. Cox, S. Deutsch, C. Ucla, M. Cruts, S . Dahoun, X. She, F. Bena, S-Y Wang, C. Van Broeckhoven, E.E. Eichler, R. Guigó, J. Rogers, P.J. de Jong, A. Reymond and S.E. Antonarakis. Islands of euchromatin-like sequence and expresse d polymorphic sequences within the short arm of human chromosome 21, Genome Research, 17:1690-1696, 2007. [Abstract]
Farré, D.,Bellora, N., Mularoni, L., Messeguer, X., Albà, M.M. (2007) Housekeeping genes tend to show reduced upstream sequene conservation. Genome Biology, 8:R140, 2007. [Abstract]
The ENCODE Project Consortium. Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project, Nature, 447:799-816, 2007. [Abstract]
Castelo R, Roverato, A. A robust procedure for Gaussian graphical model search from microarray data with p larger than n, Journal of Machine Learning Research, 7(Dec):2621-2650, 2006. [Abstract and PDF, R package]
Furney SJ, Higgins DG, Ouzounis CA, Lopez-Bigas N. Structural and functional properties of genes involved in human cancer. BMC Genomics, 7(0):3, 2006.
Mularoni, L., Veitia, R.A., Albà, M.M. (2007) Highly constrained
proteins contain an unexpectedly large number of amino acid tandem
repeats. Genomics, Vol. 89:316-325. [Abstract]
Harrow J, Denoeud F, Frankish A, Reymond A, Chen CK, Chrast J, Lagarde J, Gilbert JG, Storey R, Swarbreck D, Rossier C, Ucla C, Hubbard T, Antonarakis SE, Guigo R. GENCODE: producing a reference annotation for ENCODE. Genome Biol, 7 Suppl 1:S4.1-9, 2006.
Plass M, Eyras E. Differentiated evolutionary rates in alternative exons and the implications for splicing regulation. BMC Evol Biol, 22;6:50, 2006.
Furney SJ, Albà MM, Lopez-Bigas N. Differences in the evolutionary history of disease genes affected by dominant or recessive mutations. BMC Genomics, 7(0):3, 2006.